Section: Perspective/Opinion
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Journal Article

Navigating open-source waters: the pharmaceutical industry’s role in bioontology development

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Shawn Zheng Kai Tan, Joshua Daniel Valdez, Saritha Vettikunnel Kuriakose
Database, Volume 2025, 2025, baaf066, https://doi.org/10.1093/database/baaf066
Published: 30 September 2025
Journal Article

Integrated data-driven biotechnology research environments

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Rosalia Moreddu
Database, Volume 2025, 2025, baaf064, https://doi.org/10.1093/database/baaf064
Published: 24 September 2025
Journal Article

Working in biocuration: contemporary experiences and perspectives

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Sarah R Davies
Database, Volume 2025, 2025, baaf003, https://doi.org/10.1093/database/baaf003
Published: 12 February 2025
Journal Article

Interactive tools for functional annotation of bacterial genomes

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Morgan N Price, Adam P Arkin
Database, Volume 2024, 2024, baae089, https://doi.org/10.1093/database/baae089
Published: 06 September 2024
Journal Article

Unified and pluralistic ideals for data sharing and reuse in biodiversity

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Beckett Sterner, Steve Elliott, Edward E Gilbert, Nico M Franz
Database, Volume 2023, 2023, baad048, https://doi.org/10.1093/database/baad048
Published: 18 July 2023
Journal Article

Reviewing knowledgebase and database grant proposals in the life sciences: the role of innovation

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Peter D Karp
Database, Volume 2022, 2022, baac106, https://doi.org/10.1093/database/baac106
Published: 15 December 2022
Journal Article

Challenges and opportunities for mining adverse drug reactions: perspectives from pharma, regulatory agencies, healthcare providers and consumers

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Graciela Gonzalez-Hernandez, Martin Krallinger, Monica Muñoz, Raul Rodriguez-Esteban, Özlem Uzuner, Lynette Hirschman
Database, Volume 2022, 2022, baac071, https://doi.org/10.1093/database/baac071
Published: 02 September 2022
Journal Article

New reasons for biologists to write with a formal language

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Raul Rodriguez-Esteban
Database, Volume 2022, 2022, baac039, https://doi.org/10.1093/database/baac039
Published: 03 June 2022
Journal Article

People are essential to linking biodiversity data

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Quentin Groom, Anton Güntsch, Pieter Huybrechts, Nicole Kearney, Siobhan Leachman, Nicky Nicolson, Roderic D M Page, David P Shorthouse, Anne E Thessen, Elspeth Haston
Database, Volume 2020, 2020, baaa072, https://doi.org/10.1093/database/baaa072
Published: 27 November 2020
Journal Article

A checklist recipe: making species data open and FAIR

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Lien Reyserhove, Peter Desmet, Damiano Oldoni, Tim Adriaens, Diederik Strubbe, Amy J S Davis, Sonia Vanderhoeven, Filip Verloove, Quentin Groom
Database, Volume 2020, 2020, baaa084, https://doi.org/10.1093/database/baaa084
Published: 11 November 2020
Journal Article

Reactome and ORCID—fine-grained credit attribution for community curation

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Guilherme Viteri, Lisa Matthews, Thawfeek Varusai, Marc Gillespie, Marija Milacic, Justin Cook, Joel Weiser, Solomon Shorser, Konstantinos Sidiropoulos, Antonio Fabregat, Robin Haw, Guanming Wu, Lincoln Stein, Peter D’Eustachio, Henning Hermjakob
Database, Volume 2019, 2019, baz123, https://doi.org/10.1093/database/baz123
Published: 04 December 2019
Journal Article

Representing glycophenotypes: semantic unification of glycobiology resources for disease discovery

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Jean-Philippe F Gourdine, Matthew H Brush, Nicole A Vasilevsky, Kent Shefchek, Sebastian Köhler, Nicolas Matentzoglu, Monica C Munoz-Torres, Julie A McMurry, Xingmin Aaron Zhang, Peter N Robinson, Melissa A Haendel
Database, Volume 2019, 2019, baz114, https://doi.org/10.1093/database/baz114
Published: 18 November 2019
Journal Article

A new unbiased and highly automated approach to find new prognostic markers in preclinical research

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Martin Neidnicht, Daniela Mittermüller, Katharina Effenberger-Neidnicht
Database, Volume 2019, 2019, baz107, https://doi.org/10.1093/database/baz107
Published: 18 November 2019
Journal Article

Involving community in genes and pathway curation

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Sushma Naithani, Parul Gupta, Justin Preece, Priyanka Garg, Valerie Fraser, Lillian K Padgitt-Cobb, Matthew Martin, Kelly Vining, Pankaj Jaiswal
Database, Volume 2019, 2019, bay146, https://doi.org/10.1093/database/bay146
Published: 16 January 2019
Journal Article

Improved ontology for eukaryotic single-exon coding sequences in biological databases

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Roddy Jorquera, Carolina González, Philip Clausen, Bent Petersen, David S Holmes
Database, Volume 2018, 2018, bay089, https://doi.org/10.1093/database/bay089
Published: 18 September 2018
Journal Article

The tragedy of the biodiversity data commons: a data impediment creeping nigher?

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Nora Escribano, David Galicia, Arturo H Ariño
Database, Volume 2018, 2018, bay033, https://doi.org/10.1093/database/bay033
Published: 09 April 2018
Journal Article

To increase trust, change the social design behind aggregated biodiversity data

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Nico M Franz, Beckett W Sterner
Database, Volume 2018, 2018, bax100, https://doi.org/10.1093/database/bax100
Published: 04 January 2018
Journal Article

Information retrieval for biomedical datasets: the 2016 bioCADDIE dataset retrieval challenge

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Kirk Roberts, Anupama E. Gururaj, Xiaoling Chen, Saeid Pournejati, William R. Hersh, Dina Demner-Fushman, Lucila Ohno-Machado, Trevor Cohen, Hua Xu
Database, Volume 2017, 2017, bax068, https://doi.org/10.1093/database/bax068
Published: 26 September 2017