1-20 of 9526
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The distribution of RNA types selected for summarization.
Published: 05 February 2025
Figure 3.
The distribution of RNA types selected for summarization.
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Example summary generated by the tool. This example is an lncRNA, examples ...
Published: 05 February 2025
Figure 4.
Example summary generated by the tool. This example is an lncRNA, examples for other RNA types can be found in Appendix C of the Supplementary material .
Journal Article
LitSumm: large language models for literature summarization of noncoding RNAs
Database, Volume 2025, 2025, baaf006, https://doi.org/10.1093/database/baaf006
Published: 05 February 2025
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(a) The initial prompt used to generate a first-pass summary from the gener...
Published: 05 February 2025
Figure 1.
(a) The initial prompt used to generate a first-pass summary from the generated context. Variables are enclosed in {} and are replaced with their values before sending the prompt to the LLM. (b) Prompts used for the self-consistency checking stage including inaccurate statement detection and revisio
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A flow diagram of the whole LitSumm tool. Information from the EuropePMC AP...
Published: 05 February 2025
Figure 2.
A flow diagram of the whole LitSumm tool. Information from the EuropePMC API flows from the left to the right, through a sentence selection step before several rounds of self-checking and refinement. Finished summaries are written to disk before being uploaded to the RNAcentral database enmasse.
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The average rating per summary across all raters. Note that Rater 3 gave sc...
Published: 05 February 2025
Figure 6.
The average rating per summary across all raters. Note that Rater 3 gave scores only for a subset of 21 miRNAs.
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Example output of the veracity checker. In this case, CTBP1-DT presents two...
Published: 05 February 2025
Figure 5.
Example output of the veracity checker. In this case, CTBP1-DT presents two sentences validated as TRUE and two FALSE sentences. The offending sentences have been removed by the model in the final summary.
Journal Article
Expression of Concern: DisGeNet: a disease-centric interaction database among diseases and various associated genes
Database, Volume 2025, 2025, baaf007, https://doi.org/10.1093/database/baaf007
Published: 31 January 2025
Journal Article
Helping authors produce FAIR taxonomic data: evaluation of an author-driven phenotype data production prototype
Database, Volume 2025, 2025, baae097, https://doi.org/10.1093/database/baae097
Published: 29 January 2025
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Top-level classes in the Carex Ontology.
Published: 29 January 2025
Figure 2.
Top-level classes in the Carex Ontology.
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The matrix page of Character Recorder.
Published: 29 January 2025
Figure 4.
The matrix page of Character Recorder.
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The Character State Window, accessible when the user clicks on any data cel...
Published: 29 January 2025
Figure 5.
The Character State Window, accessible when the user clicks on any data cell of a categorical character.
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Summary of the responses to “Your experience with features of Character Rec...
Published: 29 January 2025
Figure 9.
Summary of the responses to “Your experience with features of Character Recorder” in recording clear characters compared to Excel.
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Summary of responses to “Your experience with the main components of Charac...
Published: 29 January 2025
Figure 10.
Summary of responses to “Your experience with the main components of Character Recorder - Responded quickly.”
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Summary of responses to “Your experience with the main components of Charac...
Published: 29 January 2025
Figure 13.
Summary of responses to “Your experience with the main components of Character Recorder: My experience with it was.”
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Summary of participant responses to “Your experience with features of Chara...
Published: 29 January 2025
Figure 14.
Summary of participant responses to “Your experience with features of Character Recorder.”
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Summary of participant final comparison between Character Recorder and Exce...
Published: 29 January 2025
Figure 16.
Summary of participant final comparison between Character Recorder and Excel and their recommendations.
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System diagram for the author-driven computable phenotypic data and ontolog...
Published: 29 January 2025
Figure 1.
System diagram for the author-driven computable phenotypic data and ontology development platform.
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Summary of the responses to “Your experience with the main components of Ch...
Published: 29 January 2025
Figure 8.
Summary of the responses to “Your experience with the main components of Character Recorder: - Did what I wanted it to do.”
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Summary of Participant Responses to “Your perceived task load with Characte...
Published: 29 January 2025
Figure 12.
Summary of Participant Responses to “Your perceived task load with Character Recorder.”
