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Journal Article

CircAI: a comprehensive database of CircRNA associated with A-to-I RNA editing Open Access

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Yulan Wang and others
Database, Volume 2025, 2025, baaf075, https://doi.org/10.1093/database/baaf075
Published: 22 November 2025
Journal Article

Enhancing statistical analysis of real world data Open Access

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Laha Ale and others
Database, Volume 2025, 2025, baaf073, https://doi.org/10.1093/database/baaf073
Published: 22 November 2025
Journal Article

PolED: a manually curated database of functional studies of POLE and POLD1 variants reported in humans Open Access

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Lev Tsarin and Polina V Shcherbakova
Database, Volume 2025, 2025, baaf076, https://doi.org/10.1093/database/baaf076
Published: 20 November 2025
Journal Article

InTxDB: interaction data between gram-negative bacteria secreted effectors and host proteins Open Access

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Yanyan Zhu and others
Database, Volume 2025, 2025, baaf070, https://doi.org/10.1093/database/baaf070
Published: 31 October 2025
Journal Article

CobVar—a comprehensive resource of vitamin B12-associated genomic variants Open Access

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Neha H Suresh and others
Database, Volume 2025, 2025, baaf049, https://doi.org/10.1093/database/baaf049
Published: 01 October 2025
Journal Article

Characterization and automated classification of sentences in the biomedical literature: a case study for biocuration of gene expression and protein kinase activity Open Access

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Daniela Raciti and others
Database, Volume 2025, 2025, baaf063, https://doi.org/10.1093/database/baaf063
Published: 30 September 2025
Journal Article

VineColD: an integrative database for global historical tracing and real-time monitoring of grapevine cold hardiness Open Access

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Hongrui Wang and Jason P Londo
Database, Volume 2025, 2025, baaf055, https://doi.org/10.1093/database/baaf055
Published: 27 September 2025
Journal Article

BgDB: a comprehensive genomic resource information system of bitter gourd for accelerated breeding programme Open Access

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Princy Saini and others
Database, Volume 2025, 2025, baaf039, https://doi.org/10.1093/database/baaf039
Published: 24 September 2025
Journal Article

A database on the historical and current occurrences of snakes in Eswatini Open Access

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Ara Monadjem and others
Database, Volume 2025, 2025, baaf040, https://doi.org/10.1093/database/baaf040
Published: 24 September 2025
Journal Article

MRdb: a comprehensive database of univariate and multivariate Mendelian randomization with large-scale GWAS summary data Open Access

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Qian Liu and others
Database, Volume 2025, 2025, baaf054, https://doi.org/10.1093/database/baaf054
Published: 24 September 2025
Journal Article

Gene Loss DB: a curated database for gene loss in mammals—the cetacean collection Open Access

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Gonçalo Espregueira Themudo and others
Database, Volume 2025, 2025, baaf065, https://doi.org/10.1093/database/baaf065
Published: 24 September 2025
Journal Article

StrainInfo—the central database for linked microbial strain identifiers Open Access

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Artur Lissin and others
Database, Volume 2025, 2025, baaf059, https://doi.org/10.1093/database/baaf059
Published: 24 September 2025
Journal Article

BrAPI v2: real-world applications for data integration and collaboration in the breeding and genetics community Open Access

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Peter Selby and others
Database, Volume 2025, 2025, baaf048, https://doi.org/10.1093/database/baaf048
Published: 24 September 2025
Journal Article

The state of the human coding gene catalogues Open Access

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Miguel Maquedano and others
Database, Volume 2025, 2025, baaf045, https://doi.org/10.1093/database/baaf045
Published: 24 September 2025
Journal Article

DrugCombo: an informatics bridge for anticancer drug combination Phase I trial design Open Access

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Lei Wang and others
Database, Volume 2025, 2025, baaf043, https://doi.org/10.1093/database/baaf043
Published: 24 September 2025
Journal Article

An open-source multi-semantic annotation dataset and automated recognition tool for viral carcinogenesis factors Open Access

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Honglian Huang and others
Database, Volume 2025, 2025, baaf038, https://doi.org/10.1093/database/baaf038
Published: 24 September 2025
Journal Article

The Microbe Directory: a centralized database for biological interpretation of microbiome data Open Access

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Maria A Sierra and others
Database, Volume 2025, 2025, baaf060, https://doi.org/10.1093/database/baaf060
Published: 24 September 2025
Journal Article

Automatic genetic phenotype normalization from dysmorphology physical examinations: an overview of the BioCreative VIII—Task 3 competition Open Access

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Davy Weissenbacher and others
Database, Volume 2025, 2025, baaf051, https://doi.org/10.1093/database/baaf051
Published: 24 September 2025
Journal Article

The impact of curation errors in the PDBBind Database on machine learning predictions of protein–protein binding affinity Open Access

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Jason D Gans and others
Database, Volume 2025, 2025, baaf061, https://doi.org/10.1093/database/baaf061
Published: 24 September 2025
Journal Article

p53motifDB: integration of genomic information and tumour suppressor p53 binding motifs Open Access

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Gabriele Baniulyte and others
Database, Volume 2025, 2025, baaf053, https://doi.org/10.1093/database/baaf053
Published: 24 September 2025