Section: Database update
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Journal Article

KitBase Expanded: An Integrated Genomic and Phenotypic Resource for 3,268 Fast-Neutron-Irradiated Rice Mutants

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Artur Teixeira de Araujo and others
Database, Volume 2026, 2026, baag024, https://doi.org/10.1093/database/baag024
Published: 12 June 2026
Journal Article

PASS2: update of database of structure-based sequence alignments

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Revathy Menon and others
Database, Volume 2025, 2025, baaf072, https://doi.org/10.1093/database/baaf072
Published: 13 November 2025
Journal Article

ENcyclopedia of TRAnscription Factors in Bacteria and Archaea genomes (ENTRAF) version 2.0

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Silvia Tenorio-Salgado and others
Database, Volume 2025, 2025, baaf071, https://doi.org/10.1093/database/baaf071
Published: 29 October 2025
Journal Article

GExplore 1.5: a comprehensive Caenorhabditis elegans database for the analysis of gene function with a new user-friendly web interface

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Harald Hutter and others
Database, Volume 2025, 2025, baaf044, https://doi.org/10.1093/database/baaf044
Published: 24 September 2025
Journal Article

GenDiS3 database: census on the prevalence of protein domain superfamilies of known structure in the entire sequence database

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Sarthak Joshi and others
Database, Volume 2025, 2025, baaf035, https://doi.org/10.1093/database/baaf035
Published: 09 May 2025
Journal Article

GeniePool 2.0: advancing variant analysis through CHM13-T2T, AlphaMissense, gnomAD V4 integration, and variant co-occurrence queries

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Grisha Weintraub and others
Database, Volume 2024, 2024, baae130, https://doi.org/10.1093/database/baae130
Published: 27 December 2024
Journal Article

Peptipedia v2.0: a peptide sequence database and user-friendly web platform. A major update

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Gabriel Cabas-Mora and others
Database, Volume 2024, 2024, baae113, https://doi.org/10.1093/database/baae113
Published: 08 November 2024
Journal Article

CO-19 PDB 2.0: A Comprehensive COVID-19 Database with Global Auto-Alerts, Statistical Analysis, and Cancer Correlations

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Shahid Ullah and others
Database, Volume 2024, 2024, baae072, https://doi.org/10.1093/database/baae072
Published: 26 July 2024
Journal Article

FishTEDB 2.0: an update fish transposable element (TE) database with new functions to facilitate TE research

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Feng Shao and others
Database, Volume 2024, 2024, baae044, https://doi.org/10.1093/database/baae044
Published: 03 June 2024
Journal Article

Improved insights into the SABIO-RK database via visualization

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Dorotea Dudaš and others
Database, Volume 2023, 2023, baad011, https://doi.org/10.1093/database/baad011
Published: 31 March 2023
Journal Article

BRACS: A Dataset for BReAst Carcinoma Subtyping in H&E Histology Images

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Nadia Brancati and others
Database, Volume 2022, 2022, baac093, https://doi.org/10.1093/database/baac093
Published: 17 October 2022
Journal Article

GrainGenes: a data-rich repository for small grains genetics and genomics

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Eric Yao and others
Database, Volume 2022, 2022, baac034, https://doi.org/10.1093/database/baac034
Published: 25 May 2022
Journal Article

SynLethDB 2.0: a web-based knowledge graph database on synthetic lethality for novel anticancer drug discovery

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Jie Wang and others
Database, Volume 2022, 2022, baac030, https://doi.org/10.1093/database/baac030
Published: 14 May 2022
Journal Article

TMC-SNPdb 2.0: an ethnic-specific database of Indian germline variants

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Sanket Desai and others
Database, Volume 2022, 2022, baac029, https://doi.org/10.1093/database/baac029
Published: 11 May 2022
Journal Article

PASS2.7: a database containing structure-based sequence alignments and associated features of protein domain superfamilies from SCOPe

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Teerna Bhattacharyya and others
Database, Volume 2022, 2022, baac025, https://doi.org/10.1093/database/baac025
Published: 12 April 2022
Journal Article

The Sickle Cell Disease Ontology: recent development and expansion of the universal sickle cell knowledge representation

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Gaston K Mazandu and others
Database, Volume 2022, 2022, baac014, https://doi.org/10.1093/database/baac014
Published: 01 April 2022
Journal Article

Diseases 2.0: a weekly updated database of disease–gene associations from text mining and data integration

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Dhouha Grissa and others
Database, Volume 2022, 2022, baac019, https://doi.org/10.1093/database/baac019
Published: 24 March 2022
Journal Article

Anti-CRISPRdb v2.2: an online repository of anti-CRISPR proteins including information on inhibitory mechanisms, activities and neighbors of curated anti-CRISPR proteins

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Chuan Dong and others
Database, Volume 2022, 2022, baac010, https://doi.org/10.1093/database/baac010
Published: 04 March 2022
Journal Article

DSDBASE 2.0: updated version of DiSulphide dataBASE, a database on disulphide bonds in proteins

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Neha V Kalmankar and others
Database, Volume 2022, 2022, baac005, https://doi.org/10.1093/database/baac005
Published: 01 March 2022
Journal Article

phytochemdb: a platform for virtual screening and computer-aided drug designing

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Shafi Mahmud and others
Database, Volume 2022, 2022, baac002, https://doi.org/10.1093/database/baac002
Published: 28 January 2022