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Section: Database tool
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Journal Article
VarGuideAtlas: a repository of variant interpretation guidelines Open Access
Mireia Costa and others
Database, Volume 2025, 2025, baaf017, https://doi.org/10.1093/database/baaf017
Published: 11 March 2025
Journal Article
Pipeline to explore information on genome editing using large language models and genome editing meta-database Open Access
Takayuki Suzuki and Hidemasa Bono
Database, Volume 2025, 2025, baaf022, https://doi.org/10.1093/database/baaf022
Published: 08 March 2025
Journal Article
ForestForward: visualizing and accessing integrated world forest data from the last 50 years Open Access
E. L Tejada-Gutiérrez and others
Database, Volume 2025, 2025, baaf018, https://doi.org/10.1093/database/baaf018
Published: 03 March 2025
Journal Article
TcEVdb: a database for T-cell-derived small extracellular vesicles from single-cell transcriptomes Open Access
Tao Luo and others
Database, Volume 2025, 2025, baaf012, https://doi.org/10.1093/database/baaf012
Published: 28 February 2025
Journal Article
LICEDB: light industrial core enzyme database for industrial applications and AI enzyme design Open Access
Lei Gong and others
Database, Volume 2025, 2025, baaf001, https://doi.org/10.1093/database/baaf001
Published: 18 February 2025
Journal Article
AnnCovDB: a manually curated annotation database for mutations in SARS-CoV-2 spike protein Open Access
Xiaomin Zhang and others
Database, Volume 2025, 2025, baaf002, https://doi.org/10.1093/database/baaf002
Published: 12 February 2025
Journal Article
BbGSD: Black-boned Sheep Genome SNP Database Open Access
Chunjuan He and others
Database, Volume 2025, 2025, baaf004, https://doi.org/10.1093/database/baaf004
Published: 28 January 2025
Journal Article
MiCK: a database of gut microbial genes linked with chemoresistance in cancer patients Open Access
Muhammad Shahzaib and others
Database, Volume 2024, 2024, baae124, https://doi.org/10.1093/database/baae124
Published: 21 December 2024
Journal Article
scEccDNAdb: an integrated single-cell eccDNA resource for human and mouse Open Access
Wenqing Wang and others
Database, Volume 2024, 2024, baae126, https://doi.org/10.1093/database/baae126
Published: 18 December 2024
Journal Article
Probe my Pathway (PmP): a portal to explore the chemical coverage of the human Reactome Open Access
Haejin Angela Kwak and others
Database, Volume 2024, 2024, baae116, https://doi.org/10.1093/database/baae116
Published: 03 December 2024
Journal Article
The text2term tool to map free-text descriptions of biomedical terms to ontologies Open Access
Rafael S Gonçalves and others
Database, Volume 2024, 2024, baae119, https://doi.org/10.1093/database/baae119
Published: 28 November 2024
Journal Article
athisomiRDB: A comprehensive database of Arabidopsis isomiRs Open Access
A T Vivek and others
Database, Volume 2024, 2024, baae115, https://doi.org/10.1093/database/baae115
Published: 08 November 2024
Journal Article
Advancing microbiome research through standardized data and metadata collection: introducing the Microbiome Research Data Toolkit Open Access
Lyndon Zass and others
Database, Volume 2024, 2024, baae062, https://doi.org/10.1093/database/baae062
Published: 21 August 2024
Journal Article
Aerial Wildlife Image Repository for animal monitoring with drones in the age of artificial intelligence Open Access
Sathishkumar Samiappan and others
Database, Volume 2024, 2024, baae070, https://doi.org/10.1093/database/baae070
Published: 23 July 2024
Journal Article
PANGEN: an online platform for the comparison and creation of diagnostic gene panels Open Access
Ofer Isakov and others
Database, Volume 2024, 2024, baae065, https://doi.org/10.1093/database/baae065
Published: 23 July 2024
Journal Article
ImmRNA: a database of RNAs associated with tumor immunity Open Access
Fangfang Shen and others
Database, Volume 2024, 2024, baae052, https://doi.org/10.1093/database/baae052
Published: 06 July 2024
Journal Article
MDDOmics: multi-omics resource of major depressive disorder Open Access
Yichao Zhao and others
Database, Volume 2024, 2024, baae042, https://doi.org/10.1093/database/baae042
Published: 25 June 2024
Journal Article
DMLS: an automated pipeline to extract the Drosophila modular transcription regulators and targets from massive literature articles Open Access
Tzu-Hsien Yang and others
Database, Volume 2024, 2024
Published: 20 June 2024
Journal Article
IPAD-DB: a manually curated database for experimentally verified inhibitors of proteins associated with Alzheimer’s disease Open Access
Chong Peng and others
Database, Volume 2024, 2024, baae048, https://doi.org/10.1093/database/baae048
Published: 12 June 2024
Journal Article
CoSFISH: a comprehensive reference database of COI and 18S rRNA barcodes for fish Open Access
Yuanyuan Wang and others
Database, Volume 2024, 2024, baae038, https://doi.org/10.1093/database/baae038
Published: 27 May 2024
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