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Authors: Yejin+Lee
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Journal Article
Tear fluid database: a reference website for tear fluid proteomics
Drew Mayernik, Saleh Ahmed, Eliza Williams, Tae Jin Lee, Amy Estes, Pamela Martin, Wenbo Zhi, Vishal Jhanji, Shruti Sharma, Ashok Sharma
Database, Volume 2026, 2026, baaf091, https://doi.org/10.1093/database/baaf091
Published: 16 January 2026
Journal Article
BrAPI v2: real-world applications for data integration and collaboration in the breeding and genetics community
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Peter Selby, Rafael Abbeloos, Anne-Francoise Adam-Blondon, Francisco J Agosto-Pérez, Michael Alaux, Isabelle Alic, Khaled Al-Shamaa, Johan Steven Aparicio, Jan Erik Backlund, Aldrin Batac, Sebastian Beier, Gabriel Besombes, Alice Boizet, Matthijs Brouwer, Terry Casstevens, Arnaud Charleroy, Keo Corak, Chaney Courtney, Mariano Crimi … The BrAPI Consortium
Database, Volume 2025, 2025, baaf048, https://doi.org/10.1093/database/baaf048
Published: 24 September 2025
Journal Article
CPDMS: a database system for crop physiological disorder management
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Jae-Hyeon Oh, Hwang-Weon Jeong, Il Pyung Ahn, Seon-Hwa Bae, Sung Mi Kim, Eunhee Kim, Su Jung Ra, Jinjeong Lee, Hye Yeon Choi, Young-Joo Seol
Database, Volume 2025, 2025, baaf031, https://doi.org/10.1093/database/baaf031
Published: 22 April 2025
Journal Article
mirTarCLASH: a comprehensive miRNA target database based on chimeric read-based experiments
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Tzu-Hsien Yang, Xiang-Wei Li, Yuan-Han Lee, Shang-Yi Lu, Wei-Sheng Wu, Heng-Chi Lee
Database, Volume 2025, 2025, baaf023, https://doi.org/10.1093/database/baaf023
Published: 05 April 2025
Journal Article
Building resource-efficient community databases using open-source software
PDF
Sook Jung, Chun-Huai Cheng, Taein Lee, Katheryn Buble, Jodi Humann, Ping Zheng, Jing Yu, Dorrie Main
Database, Volume 2025, 2025, baaf005, https://doi.org/10.1093/database/baaf005
Published: 12 February 2025
Journal Article
ELiAH: the atlas of E3 ligases in human tissues for targeted protein degradation with reduced off-target effect
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Hyojung Paik, Chunryong Oh, Sajid Hussain, Sangjae Seo, Soon Woo Park, Tae Lyun Ko, Ari Lee
Database, Volume 2024, 2024, baae111, https://doi.org/10.1093/database/baae111
Published: 12 October 2024
Journal Article
Autoinhibited Protein Database: a curated database of autoinhibitory domains and their autoinhibition mechanisms
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Daeahn Cho, Hyang-Mi Lee, Ji Ah Kim, Jae Gwang Song, Su-hee Hwang, Bomi Lee, Jinsil Park, Kha Mong Tran, Jiwon Kim, Phuong Ngoc Lam Vo, Jooeun Bae, Teerapat Pimt, Kangseok Lee, Jörg Gsponer, Hyung Wook Kim, Dokyun Na
Database, Volume 2024, 2024, baae085, https://doi.org/10.1093/database/baae085
Published: 28 August 2024
Journal Article
The overview of the BioRED (Biomedical Relation Extraction Dataset) track at BioCreative VIII
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Rezarta Islamaj, Po-Ting Lai, Chih-Hsuan Wei, Ling Luo, Tiago Almeida, Richard A. A Jonker, Sofia I. R Conceição, Diana F Sousa, Cong-Phuoc Phan, Jung-Hsien Chiang, Jiru Li, Dinghao Pan, Wilailack Meesawad, Richard Tzong-Han Tsai, M. Janina Sarol, Gibong Hong, Airat Valiev, Elena Tutubalina, Shao-Man Lee … Zhiyong Lu
Database, Volume 2024, 2024, baae069, https://doi.org/10.1093/database/baae069
Published: 08 August 2024
Journal Article
AHP DB: a reference database of proteins in the human aqueous humor
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Tae Jin Lee, Arnav Goyal, Garrett Jones, Joshua Glass, Vishal Doshi, Kathryn Bollinger, Lane Ulrich, Saleh Ahmed, Sai Karthik Kodeboyina, Amy Estes, Marc Töteberg-Harms, Wenbo Zhi, Shruti Sharma, Ashok Sharma
Database, Volume 2024, 2024, baae001, https://doi.org/10.1093/database/baae001
Published: 29 January 2024
Journal Article
CCIDB: a manually curated cell–cell interaction database with cell context information
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Jin Young Noh, Hae In Lee, Ji-Hye Choi, Seong-Ho Cho, Yoon Hui Yi, Ji Hyun Lim, Eun Been Myung, Ye Ju Shin, Hyo Jin Shin, Hyun Goo Woo
Database, Volume 2023, 2023, baad057, https://doi.org/10.1093/database/baad057
Published: 11 August 2023
Journal Article
Task reformulation and data-centric approach for Twitter medication name extraction
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Yu Zhang, Jong Kang Lee, Jen-Chieh Han, Richard Tzong-Han Tsai
Database, Volume 2022, 2022, baac067, https://doi.org/10.1093/database/baac067
Published: 23 August 2022
Journal Article
ProBioQuest: a database and semantic analysis engine for literature, clinical trials and patents related to probiotics
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Po Lam Chan, Susana Lauw, Ka Lee Ma, Nelson Kei, Ka Leong Ma, Yiu On Wong, Ho Yan Lam, Yee Yung Ting, Tsz Kwan Yau, Wenyan Nong, Dandan Huang, Yichun Xie, Peter Chi Keung Cheung, Hoi Shan Kwan
Database, Volume 2022, 2022, baac059, https://doi.org/10.1093/database/baac059
Published: 15 July 2022
Journal Article
lncExplore: a database of pan-cancer analysis and systematic functional annotation for lncRNAs from RNA-sequencing data
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Yi-Wei Lee, Ming Chen, I-Fang Chung, Ting-Yu Chang
Database, Volume 2021, 2021, baab053, https://doi.org/10.1093/database/baab053
Published: 31 August 2021
Journal Article
The Breeding Information Management System (BIMS): an online resource for crop breeding
PDF
Sook Jung, Taein Lee, Ksenija Gasic, B. Todd Campbell, Jing Yu, Jodi Humann, Sushan Ru, Daniel Edge-Garza, Heidi Hough, Dorrie Main
Database, Volume 2021, 2021, baab054, https://doi.org/10.1093/database/baab054
Published: 20 August 2021
Journal Article
Tripal MegaSearch: a tool for interactive and customizable query and download of big data
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Sook Jung, Chun-Huai Cheng, Katheryn Buble, Taein Lee, Jodi Humann, Jing Yu, James Crabb, Heidi Hough, Dorrie Main
Database, Volume 2021, 2021, baab023, https://doi.org/10.1093/database/baab023
Published: 26 April 2021
Journal Article
UbiNet 2.0: a verified, classified, annotated and updated database of E3 ubiquitin ligase–substrate interactions
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Zhongyan Li, Siyu Chen, Jhih-Hua Jhong, Yuxuan Pang, Kai-Yao Huang, Shangfu Li, Tzong-Yi Lee
Database, Volume 2021, 2021, baab010, https://doi.org/10.1093/database/baab010
Published: 08 March 2021
Journal Article
Tripal MapViewer: A tool for interactive visualization and comparison of genetic maps
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Katheryn Buble, Sook Jung, Jodi L Humann, Jing Yu, Chun-Huai Cheng, Taein Lee, Stephen P Ficklin, Heidi Hough, Bradford Condon, Margaret E Staton, Jill L Wegrzyn, Dorrie Main
Database, Volume 2019, 2019, baz100, https://doi.org/10.1093/database/baz100
Published: 05 November 2019
Journal Article
VariED: the first integrated database of gene annotation and expression profiles for variants related to human diseases
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Chien-Yueh Lee, Amrita Chattopadhyay, Li-Mei Chiang, Jyh-Ming Jimmy Juang, Liang-Chuan Lai, Mong-Hsun Tsai, Tzu-Pin Lu, Eric Y Chuang
Database, Volume 2019, 2019, baz075, https://doi.org/10.1093/database/baz075
Published: 17 July 2019
Journal Article
PTSD Biomarker Database: deep dive metadatabase for PTSD biomarkers, visualizations and analysis tools
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Daniel Domingo-Fernández, Allison Provost, Alpha Tom Kodamullil, Josep Marín-Llaó, Heather Lasseter, Kristophe Diaz, Nikolaos P Daskalakis, Lee Lancashire, Martin Hofmann-Apitius, Magali Haas
Database, Volume 2019, 2019, baz081, https://doi.org/10.1093/database/baz081
Published: 29 June 2019
Journal Article
The radish genome database (RadishGD): an integrated information resource for radish genomics
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Hee-Ju Yu, Seunghoon Baek, Young-Joon Lee, Ara Cho, Jeong-Hwan Mun
Database, Volume 2019, 2019, baz009, https://doi.org/10.1093/database/baz009
Published: 05 February 2019