Authors: Tiago Almeida
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Journal Article

The overview of the BioRED (Biomedical Relation Extraction Dataset) track at BioCreative VIII

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Rezarta Islamaj, Po-Ting Lai, Chih-Hsuan Wei, Ling Luo, Tiago Almeida, Richard A. A Jonker, Sofia I. R Conceição, Diana F Sousa, Cong-Phuoc Phan, Jung-Hsien Chiang, Jiru Li, Dinghao Pan, Wilailack Meesawad, Richard Tzong-Han Tsai, M. Janina Sarol, Gibong Hong, Airat Valiev, Elena Tutubalina, Shao-Man Lee … Zhiyong Lu
Database, Volume 2024, 2024, baae069, https://doi.org/10.1093/database/baae069
Published: 08 August 2024
Journal Article

Multi-head CRF classifier for biomedical multi-class named entity recognition on Spanish clinical notes

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Richard A A Jonker, Tiago Almeida, Rui Antunes, João R Almeida, Sérgio Matos
Database, Volume 2024, 2024, baae068, https://doi.org/10.1093/database/baae068
Published: 31 July 2024
Journal Article

Towards discovery: an end-to-end system for uncovering novel biomedical relations

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Tiago Almeida, Richard A A Jonker, Rui Antunes, João R Almeida, Sérgio Matos
Database, Volume 2024, 2024, baae057, https://doi.org/10.1093/database/baae057
Published: 11 July 2024
Journal Article

Automatic Extraction of Medication Mentions from Tweets—Overview of the BioCreative VII Shared Task 3 Competition

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Davy Weissenbacher, Karen O’Connor, Siddharth Rawal, Yu Zhang, Richard Tzong-Han Tsai, Timothy Miller, Dongfang Xu, Carol Anderson, Bo Liu, Qing Han, Jinfeng Zhang, Igor Kulev, Berkay Köprü, Raul Rodriguez-Esteban, Elif Ozkirimli, Ammer Ayach, Roland Roller, Stephen Piccolo, Peijin Han … Graciela Gonzalez-Hernandez
Database, Volume 2023, 2023, baac108, https://doi.org/10.1093/database/baac108
Published: 03 February 2023
Journal Article

Chemical identification and indexing in PubMed full-text articles using deep learning and heuristics

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Tiago Almeida, Rui Antunes, João F. Silva, João R Almeida, Sérgio Matos
Database, Volume 2022, 2022, baac047, https://doi.org/10.1093/database/baac047
Published: 01 July 2022