Authors: Sandra Orchard
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Journal Article

The landscape of microRNA interaction annotation: analysis of three rare disorders as a case study

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Simona Panni, Kalpana Panneerselvam, Pablo Porras, Margaret Duesbury, Livia Perfetto, Luana Licata, Henning Hermjakob, Sandra Orchard
Database, Volume 2023, 2023, baad066, https://doi.org/10.1093/database/baad066
Published: 11 October 2023
Journal Article

Gene Ontology curation of the blood–brain barrier to improve the analysis of Alzheimer’s and other neurological diseases

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Shirin C C Saverimuttu, Barbara Kramarz, Milagros Rodríguez-López, Penelope Garmiri, Helen Attrill, Katherine E Thurlow, Marios Makris, Sandra de Miranda Pinheiro, Sandra Orchard, Ruth C Lovering
Database, Volume 2021, 2021, baab067, https://doi.org/10.1093/database/baab067
Published: 26 October 2021
Journal Article

Overview of the interactive task in BioCreative V

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Qinghua Wang, Shabbir S. Abdul, Lara Almeida, Sophia Ananiadou, Yalbi I. Balderas-Martínez, Riza Batista-Navarro, David Campos, Lucy Chilton, Hui-Jou Chou, Gabriela Contreras, Laurel Cooper, Hong-Jie Dai, Barbra Ferrell, Juliane Fluck, Socorro Gama-Castro, Nancy George, Georgios Gkoutos, Afroza K. Irin, Lars J. Jensen … Cecilia N. Arighi
Database, Volume 2016, 2016, baw119, https://doi.org/10.1093/database/baw119
Published: 01 September 2016
Journal Article

Gene regulation knowledge commons: community action takes care of DNA binding transcription factors

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Sushil Tripathi, Steven Vercruysse, Konika Chawla, Karen R. Christie, Judith A. Blake, Rachael P. Huntley, Sandra Orchard, Henning Hermjakob, Liv Thommesen, Astrid Lægreid, Martin Kuiper
Database, Volume 2016, 2016, baw088, https://doi.org/10.1093/database/baw088
Published: 05 June 2016
Journal Article

The Confidence Information Ontology: a step towards a standard for asserting confidence in annotations

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Frederic B. Bastian, Marcus C. Chibucos, Pascale Gaudet, Michelle Giglio, Gemma L. Holliday, Hong Huang, Suzanna E. Lewis, Anne Niknejad, Sandra Orchard, Sylvain Poux, Nives Skunca, Marc Robinson-Rechavi
Database, Volume 2015, 2015, bav043, https://doi.org/10.1093/database/bav043
Published: 09 May 2015
Journal Article

Shared resources, shared costs—leveraging biocuration resources

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Sandra Orchard, Henning Hermjakob
Database, Volume 2015, 2015, bav009, https://doi.org/10.1093/database/bav009
Published: 16 March 2015
Journal Article

Capturing cooperative interactions with the PSI-MI format

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Kim Van Roey, Sandra Orchard, Samuel Kerrien, Marine Dumousseau, Sylvie Ricard-Blum, Henning Hermjakob, Toby J. Gibson
Database, Volume 2013, 2013, bat066, https://doi.org/10.1093/database/bat066
Published: 24 September 2013
Journal Article

The HUPO proteomics standards initiative- mass spectrometry controlled vocabulary

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Gerhard Mayer, Luisa Montecchi-Palazzi, David Ovelleiro, Andrew R. Jones, Pierre-Alain Binz, Eric W. Deutsch, Matthew Chambers, Marius Kallhardt, Fredrik Levander, James Shofstahl, Sandra Orchard, Juan Antonio Vizcaíno, Henning Hermjakob, Christian Stephan, Helmut E. Meyer, Martin Eisenacher, on behalf of the HUPO-PSI Group
Database, Volume 2013, 2013, bat009, https://doi.org/10.1093/database/bat009
Published: 12 March 2013
Journal Article

Towards BioDBcore: a community-defined information specification for biological databases

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Pascale Gaudet, Amos Bairoch, Dawn Field, Susanna-Assunta Sansone, Chris Taylor, Teresa K. Attwood, Alex Bateman, Judith A. Blake, Carol J. Bult, J. Michael Cherry, Rex L. Chisholm, Guy Cochrane, Charles E. Cook, Janan T. Eppig, Michael Y. Galperin, Robert Gentleman, Carole A. Goble, Takashi Gojobori, John M. Hancock … on behalf of the BioDBCore working group
Database, Volume 2011, 2011, baq027, https://doi.org/10.1093/database/baq027
Published: 04 January 2011