Authors: Rui Antunes
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Journal Article

Multi-head CRF classifier for biomedical multi-class named entity recognition on Spanish clinical notes

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Richard A A Jonker, Tiago Almeida, Rui Antunes, João R Almeida, Sérgio Matos
Database, Volume 2024, 2024, baae068, https://doi.org/10.1093/database/baae068
Published: 31 July 2024
Journal Article

Towards discovery: an end-to-end system for uncovering novel biomedical relations

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Tiago Almeida, Richard A A Jonker, Rui Antunes, João R Almeida, Sérgio Matos
Database, Volume 2024, 2024, baae057, https://doi.org/10.1093/database/baae057
Published: 11 July 2024
Journal Article

Chemical identification and indexing in full-text articles: an overview of the NLM-Chem track at BioCreative VII

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Robert Leaman, Rezarta Islamaj, Virginia Adams, Mohammed A Alliheedi, João Rafael Almeida, Rui Antunes, Robert Bevan, Yung-Chun Chang, Arslan Erdengasileng, Matthew Hodgskiss, Ryuki Ida, Hyunjae Kim, Keqiao Li, Robert E Mercer, Lukrécia Mertová, Ghadeer Mobasher, Hoo-Chang Shin, Mujeen Sung, Tomoki Tsujimura … Zhiyong Lu
Database, Volume 2023, 2023, baad005, https://doi.org/10.1093/database/baad005
Published: 07 March 2023
Journal Article

Chemical identification and indexing in PubMed full-text articles using deep learning and heuristics

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Tiago Almeida, Rui Antunes, João F. Silva, João R Almeida, Sérgio Matos
Database, Volume 2022, 2022, baac047, https://doi.org/10.1093/database/baac047
Published: 01 July 2022
Journal Article

Extraction of chemical–protein interactions from the literature using neural networks and narrow instance representation

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Rui Antunes, Sérgio Matos
Database, Volume 2019, 2019, baz095, https://doi.org/10.1093/database/baz095
Published: 17 October 2019
Journal Article

Overview of the BioCreative VI Precision Medicine Track: mining protein interactions and mutations for precision medicine

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Rezarta Islamaj Doğan, Sun Kim, Andrew Chatr-aryamontri, Chih-Hsuan Wei, Donald C Comeau, Rui Antunes, Sérgio Matos, Qingyu Chen, Aparna Elangovan, Nagesh C Panyam, Karin Verspoor, Hongfang Liu, Yanshan Wang, Zhuang Liu, Berna Altınel, Zehra Melce Hüsünbeyi, Arzucan Özgür, Aris Fergadis, Chen-Kai Wang … Zhiyong Lu
Database, Volume 2019, 2019, bay147, https://doi.org/10.1093/database/bay147
Published: 28 January 2019