Authors: Paul W Sternberg
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Journal Article

Characterization and automated classification of sentences in the biomedical literature: a case study for biocuration of gene expression and protein kinase activity

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Daniela Raciti, Kimberly M Van Auken, Valerio Arnaboldi, Christopher J Tabone, Hans-Michael Muller, Paul W Sternberg
Database, Volume 2025, 2025, baaf063, https://doi.org/10.1093/database/baaf063
Published: 30 September 2025
Journal Article

Wormicloud: a new text summarization tool based on word clouds to explore the C. elegans literature

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Valerio Arnaboldi, Jaehyoung Cho, Paul W Sternberg
Database, Volume 2021, 2021, baab015, https://doi.org/10.1093/database/baab015
Published: 31 March 2021
Journal Article

Automated generation of gene summaries at the Alliance of Genome Resources

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Ranjana Kishore, Valerio Arnaboldi, Ceri E Van Slyke, Juancarlos Chan, Robert S Nash, Jose M Urbano, Mary E Dolan, Stacia R Engel, Mary Shimoyama, Paul W Sternberg, the Alliance of Genome Resources
Database, Volume 2020, 2020, baaa037, https://doi.org/10.1093/database/baaa037
Published: 19 June 2020
Journal Article

Text mining meets community curation: a newly designed curation platform to improve author experience and participation at WormBase

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Valerio Arnaboldi, Daniela Raciti, Kimberly Van Auken, Juancarlos N Chan, Hans-Michael Müller, Paul W Sternberg
Database, Volume 2020, 2020, baaa006, https://doi.org/10.1093/database/baaa006
Published: 17 March 2020
Journal Article

Micropublication: incentivizing community curation and placing unpublished data into the public domain

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Daniela Raciti, Karen Yook, Todd W Harris, Tim Schedl, Paul W Sternberg
Database, Volume 2018, 2018, bay013, https://doi.org/10.1093/database/bay013
Published: 02 March 2018
Journal Article

BC4GO: a full-text corpus for the BioCreative IV GO task

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Kimberly Van Auken, Mary L. Schaeffer, Peter McQuilton, Stanley J. F. Laulederkind, Donghui Li, Shur-Jen Wang, G. Thomas Hayman, Susan Tweedie, Cecilia N. Arighi, James Done, Hans-Michael Müller, Paul W. Sternberg, Yuqing Mao, Chih-Hsuan Wei, Zhiyong Lu
Database, Volume 2014, 2014, bau074, https://doi.org/10.1093/database/bau074
Published: 28 July 2014
Journal Article

Text mining in the biocuration workflow: applications for literature curation at WormBase, dictyBase and TAIR

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Kimberly Van Auken, Petra Fey, Tanya Z. Berardini, Robert Dodson, Laurel Cooper, Donghui Li, Juancarlos Chan, Yuling Li, Siddhartha Basu, Hans-Michael Muller, Rex Chisholm, Eva Huala, Paul W. Sternberg, the WormBase Consortium
Database, Volume 2012, 2012, bas040, https://doi.org/10.1093/database/bas040
Published: 15 November 2012