Authors: Melissa Haendel
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Journal Article

Epilepsy disease classification: a community effort to enhance the Mondo Disease Ontology

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Nicole Vasilevsky, Sarah Gehrke, Kathleen Mullen, Subit Barua, Ian Braun, Tobias Brünger, Curtis Coughlin, II, Alina Ivaniuk, Daniel Korn, Dennis Lal, Stephanie Marsh, Elaine O’Loughlin, Daniel Olson, Yousif Shwetar, Christalena Sofocleous, Vanessa Vogel-Farley, Heidi Grabenstatter, Melissa Haendel, Christopher Mungall, Sabrina Toro
Database, Volume 2026, 2026, baag004, https://doi.org/10.1093/database/baag004
Published: 16 February 2026
Journal Article

Ontology Development Kit: a toolkit for building, maintaining and standardizing biomedical ontologies

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Nicolas Matentzoglu, Damien Goutte-Gattat, Shawn Zheng Kai Tan, James P Balhoff, Seth Carbon, Anita R Caron, William D Duncan, Joe E Flack, Melissa Haendel, Nomi L Harris, William R Hogan, Charles Tapley Hoyt, Rebecca C Jackson, HyeongSik Kim, Huseyin Kir, Martin Larralde, Julie A McMurry, James A Overton, Bjoern Peters … David Osumi-Sutherland
Database, Volume 2022, 2022, baac087, https://doi.org/10.1093/database/baac087
Published: 08 October 2022
Journal Article

A Simple Standard for Sharing Ontological Mappings (SSSOM)

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Nicolas Matentzoglu, James P Balhoff, Susan M Bello, Chris Bizon, Matthew Brush, Tiffany J Callahan, Christopher G Chute, William D Duncan, Chris T Evelo, Davera Gabriel, John Graybeal, Alasdair Gray, Benjamin M Gyori, Melissa Haendel, Henriette Harmse, Nomi L Harris, Ian Harrow, Harshad B Hegde, Amelia L Hoyt … Christopher J Mungall
Database, Volume 2022, 2022, baac035, https://doi.org/10.1093/database/baac035
Published: 25 May 2022
Journal Article

The landscape of nutri-informatics: a review of current resources and challenges for integrative nutrition research

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Lauren Chan, Nicole Vasilevsky, Anne Thessen, Julie McMurry, Melissa Haendel
Database, Volume 2021, 2021, baab003, https://doi.org/10.1093/database/baab003
Published: 25 January 2021
Journal Article

Gold-standard ontology-based anatomical annotation in the CRAFT Corpus

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Michael Bada, Nicole Vasilevsky, William A Baumgartner, Jr, Melissa Haendel, Lawrence E Hunter
Database, Volume 2017, 2017, bax087, https://doi.org/10.1093/database/bax087
Published: 27 December 2017
Journal Article

An overview of the BioCreative 2012 Workshop Track III: interactive text mining task

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Cecilia N. Arighi, Ben Carterette, K. Bretonnel Cohen, Martin Krallinger, W. John Wilbur, Petra Fey, Robert Dodson, Laurel Cooper, Ceri E. Van Slyke, Wasila Dahdul, Paula Mabee, Donghui Li, Bethany Harris, Marc Gillespie, Silvia Jimenez, Phoebe Roberts, Lisa Matthews, Kevin Becker, Harold Drabkin … Cathy Wu
Database, Volume 2013, 2013, bas056, https://doi.org/10.1093/database/bas056
Published: 16 January 2013
Journal Article

Research resources: curating the new eagle-i discovery system

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Nicole Vasilevsky, Tenille Johnson, Karen Corday, Carlo Torniai, Matthew Brush, Erik Segerdell, Melanie Wilson, Chris Shaffer, David Robinson, Melissa Haendel
Database, Volume 2012, 2012, bar067, https://doi.org/10.1093/database/bar067
Published: 02 May 2012