Authors: Ling Luo
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Journal Article

Automatic genetic phenotype normalization from dysmorphology physical examinations: an overview of the BioCreative VIII—Task 3 competition

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Davy Weissenbacher, Xinwei Zhao, Jessica R C Priestley, Katherine M Szigety, Sarah F Schmidt, Karen O'Connor, Ekin Soysal, Kirk Roberts, Jiewei Qi, Ling Luo, Zhihao Yang, Hongfei Lin, Hajung Kim, Chanhwi Kim, Jiwoong Sohn, Tim Beck, Marek Rei, Sunkyu Kim, T Ian Simpson … Graciela Gonzalez-Hernandez
Database, Volume 2025, 2025, baaf051, https://doi.org/10.1093/database/baaf051
Published: 24 September 2025
Journal Article

The biomedical relationship corpus of the BioRED track at the BioCreative VIII challenge and workshop

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Rezarta Islamaj, Chih-Hsuan Wei, Po-Ting Lai, Ling Luo, Cathleen Coss, Preeti Gokal Kochar, Nicholas Miliaras, Oleg Rodionov, Keiko Sekiya, Dorothy Trinh, Deborah Whitman, Zhiyong Lu
Database, Volume 2024, 2024, baae071, https://doi.org/10.1093/database/baae071
Published: 09 August 2024
Journal Article

The overview of the BioRED (Biomedical Relation Extraction Dataset) track at BioCreative VIII

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Rezarta Islamaj, Po-Ting Lai, Chih-Hsuan Wei, Ling Luo, Tiago Almeida, Richard A. A Jonker, Sofia I. R Conceição, Diana F Sousa, Cong-Phuoc Phan, Jung-Hsien Chiang, Jiru Li, Dinghao Pan, Wilailack Meesawad, Richard Tzong-Han Tsai, M. Janina Sarol, Gibong Hong, Airat Valiev, Elena Tutubalina, Shao-Man Lee … Zhiyong Lu
Database, Volume 2024, 2024, baae069, https://doi.org/10.1093/database/baae069
Published: 08 August 2024
Journal Article

Assigning species information to corresponding genes by a sequence labeling framework

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Ling Luo, Chih-Hsuan Wei, Po-Ting Lai, Qingyu Chen, Rezarta Islamaj, Zhiyong Lu
Database, Volume 2022, 2022, baac090, https://doi.org/10.1093/database/baac090
Published: 13 October 2022
Journal Article

A sequence labeling framework for extracting drug–protein relations from biomedical literature

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Ling Luo, Po-Ting Lai, Chih-Hsuan Wei, Zhiyong Lu
Database, Volume 2022, 2022, baac058, https://doi.org/10.1093/database/baac058
Published: 20 July 2022
Journal Article

Overview of the BioCreative VI Precision Medicine Track: mining protein interactions and mutations for precision medicine

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Rezarta Islamaj Doğan, Sun Kim, Andrew Chatr-aryamontri, Chih-Hsuan Wei, Donald C Comeau, Rui Antunes, Sérgio Matos, Qingyu Chen, Aparna Elangovan, Nagesh C Panyam, Karin Verspoor, Hongfang Liu, Yanshan Wang, Zhuang Liu, Berna Altınel, Zehra Melce Hüsünbeyi, Arzucan Özgür, Aris Fergadis, Chen-Kai Wang … Zhiyong Lu
Database, Volume 2019, 2019, bay147, https://doi.org/10.1093/database/bay147
Published: 28 January 2019
Journal Article

Document triage for identifying protein–protein interactions affected by mutations: a neural network ensemble approach

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Ling Luo, Zhihao Yang, Hongfei Lin, Jian Wang
Database, Volume 2018, 2018, bay097, https://doi.org/10.1093/database/bay097
Published: 19 September 2018