Authors: Karen+Rothfels
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Journal Article

Automatic genetic phenotype normalization from dysmorphology physical examinations: an overview of the BioCreative VIII—Task 3 competition

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Davy Weissenbacher and others
Database, Volume 2025, 2025, baaf051, https://doi.org/10.1093/database/baaf051
Published: 24 September 2025
Journal Article

Pathway-based, reaction-specific annotation of disease variants for elucidation of molecular phenotypes

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Marija Orlic-Milacic and others
Database, Volume 2024, 2024, baae031, https://doi.org/10.1093/database/baae031
Published: 07 May 2024
Journal Article

Automatic Extraction of Medication Mentions from Tweets—Overview of the BioCreative VII Shared Task 3 Competition

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Davy Weissenbacher and others
Database, Volume 2023, 2023, baac108, https://doi.org/10.1093/database/baac108
Published: 03 February 2023
Journal Article

Overview of the COVID-19 text mining tool interactive demonstration track in BioCreative VII

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Andrew Chatr-aryamontri and others
Database, Volume 2022, 2022, baac084, https://doi.org/10.1093/database/baac084
Published: 05 October 2022
Journal Article

Evaluating the predictive accuracy of curated biological pathways in a public knowledgebase

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Adam J Wright and others
Database, Volume 2022, 2022, baac009, https://doi.org/10.1093/database/baac009
Published: 06 March 2022
Journal Article

The United States Swine Pathogen Database: integrating veterinary diagnostic laboratory sequence data to monitor emerging pathogens of swine

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Tavis K Anderson and others
Database, Volume 2021, 2021, baab078, https://doi.org/10.1093/database/baab078
Published: 15 December 2021
Journal Article

RESTful API for iPTMnet: a resource for protein post-translational modification network discovery

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Sachin Gavali and others
Database, Volume 2020, 2020, baz157, https://doi.org/10.1093/database/baz157
Published: 12 May 2020
Journal Article

iTextMine: integrated text-mining system for large-scale knowledge extraction from the literature

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Jia Ren and others
Database, Volume 2018, 2018, bay128, https://doi.org/10.1093/database/bay128
Published: 14 December 2018
Journal Article

DEXTER: Disease-Expression Relation Extraction from Text

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Samir Gupta and others
Database, Volume 2018, 2018, bay045, https://doi.org/10.1093/database/bay045
Published: 30 May 2018
Journal Article

Micropublication: incentivizing community curation and placing unpublished data into the public domain

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Daniela Raciti and others
Database, Volume 2018, 2018, bay013, https://doi.org/10.1093/database/bay013
Published: 02 March 2018
Journal Article

Overview of the interactive task in BioCreative V

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Qinghua Wang and others
Database, Volume 2016, 2016, baw119, https://doi.org/10.1093/database/baw119
Published: 01 September 2016
Journal Article

Crowdsourcing and curation: perspectives from biology and natural language processing

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Lynette Hirschman and others
Database, Volume 2016, 2016, baw115, https://doi.org/10.1093/database/baw115
Published: 08 August 2016
Journal Article

Gene regulation knowledge commons: community action takes care of DNA binding transcription factors

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Sushil Tripathi and others
Database, Volume 2016, 2016, baw088, https://doi.org/10.1093/database/baw088
Published: 05 June 2016
Journal Article

Construction of phosphorylation interaction networks by text mining of full-length articles using the eFIP system

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Catalina O. Tudor and others
Database, Volume 2015, 2015, bav020, https://doi.org/10.1093/database/bav020
Published: 31 March 2015
Journal Article

Standardized description of scientific evidence using the Evidence Ontology (ECO)

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Marcus C. Chibucos and others
Database, Volume 2014, 2014, bau075, https://doi.org/10.1093/database/bau075
Published: 21 July 2014
Journal Article

Finding needles in haystacks: linking scientific names, reference specimens and molecular data for Fungi

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Conrad L. Schoch and others
Database, Volume 2014, 2014, bau061, https://doi.org/10.1093/database/bau061
Published: 28 June 2014
Journal Article

Gene Ontology annotation of sequence-specific DNA binding transcription factors: setting the stage for a large-scale curation effort

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Sushil Tripathi and others
Database, Volume 2013, 2013, bat062, https://doi.org/10.1093/database/bat062
Published: 27 August 2013
Journal Article

Construction of protein phosphorylation networks by data mining, text mining and ontology integration: analysis of the spindle checkpoint

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Karen E. Ross and others
Database, Volume 2013, 2013, bat038, https://doi.org/10.1093/database/bat038
Published: 06 June 2013
Journal Article

Research resources: curating the new eagle-i discovery system

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Nicole Vasilevsky and others
Database, Volume 2012, 2012, bar067, https://doi.org/10.1093/database/bar067
Published: 02 May 2012
Journal Article

Text mining for the biocuration workflow

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Lynette Hirschman and others
Database, Volume 2012, 2012, bas020, https://doi.org/10.1093/database/bas020
Published: 18 April 2012