Authors: Julio Collado-Vides
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Journal Article

Knowledge extraction for assisted curation of summaries of bacterial transcription factor properties

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Carlos-Francisco Méndez-Cruz, Antonio Blanchet, Alan Godínez, Ignacio Arroyo-Fernández, Socorro Gama-Castro, Sara Berenice Martínez-Luna, Cristian González-Colín, Julio Collado-Vides
Database, Volume 2020, 2020, baaa109, https://doi.org/10.1093/database/baaa109
Published: 11 December 2020
Journal Article

First steps in automatic summarization of transcription factor properties for RegulonDB: classification of sentences about structural domains and regulated processes

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Carlos-Francisco Méndez-Cruz, Socorro Gama-Castro, Citlalli Mejía-Almonte, Marco-Polo Castillo-Villalba, Luis-José Muñiz-Rascado, Julio Collado-Vides
Database, Volume 2017, 2017, bax070, https://doi.org/10.1093/database/bax070
Published: 26 September 2017
Journal Article

Improving biocuration of microRNAs in diseases: a case study in idiopathic pulmonary fibrosis

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Yalbi Itzel Balderas-Martínez, Fabio Rinaldi, Gabriela Contreras, Hilda Solano-Lira, Mishael Sánchez-Pérez, Julio Collado-Vides, Moisés Selman, Annie Pardo
Database, Volume 2017, 2017, bax030, https://doi.org/10.1093/database/bax030
Published: 22 April 2017
Journal Article

Strategies towards digital and semi-automated curation in RegulonDB

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Fabio Rinaldi, Oscar Lithgow, Socorro Gama-Castro, Hilda Solano, Alejandra López-Fuentes, Luis José Muñiz Rascado, Cecilia Ishida-Gutiérrez, Carlos-Francisco Méndez-Cruz, Julio Collado-Vides
Database, Volume 2017, 2017, bax012, https://doi.org/10.1093/database/bax029
Published: 17 April 2017
Journal Article

Strategies towards digital and semi-automated curation in RegulonDB

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Fabio Rinaldi, Oscar Lithgow, Socorro Gama-Castro, Hilda Solano, Alejandra López-Fuentes, Luis José Muñiz Rascado, Cecilia Ishida-Gutiérrez, Carlos-Francisco Méndez-Cruz, Julio Collado-Vides
Database, Volume 2017, 2017, bax012, https://doi.org/10.1093/database/bax012
Published: 18 March 2017
Journal Article

Assisted curation of regulatory interactions and growth conditions of OxyR in E. coli K-12

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Socorro Gama-Castro, Fabio Rinaldi, Alejandra López-Fuentes, Yalbi Itzel Balderas-Martínez, Simon Clematide, Tilia Renate Ellendorff, Alberto Santos-Zavaleta, Hernani Marques-Madeira, Julio Collado-Vides
Database, Volume 2014, 2014, bau049, https://doi.org/10.1093/database/bau049
Published: 04 June 2014
Journal Article

Evidence classification of high-throughput protocols and confidence integration in RegulonDB

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Verena Weiss, Alejandra Medina-Rivera, Araceli M. Huerta, Alberto Santos-Zavaleta, Heladia Salgado, Enrique Morett, Julio Collado-Vides
Database, Volume 2013, 2013, bas059, https://doi.org/10.1093/database/bas059
Published: 17 January 2013