Authors: Jennifer R Smith
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Journal Article

Mapping of EFO terms from the GWAS catalog data to multiple ontologies at the Rat Genome Database

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Stanley J F Laulederkind, G T Hayman, Shur-Jen Wang, Carissa A Park, Mary L Kaldunski, Mahima Vedi, Marek A Tutaj, Logan Lamers, Jennifer R Smith, Jeffrey L de Pons, Melinda R Dwinell, Anne E Kwitek
Database, Volume 2026, 2026, baag008, https://doi.org/10.1093/database/baag008
Published: 27 February 2026
Journal Article

Standardized pipelines support and facilitate integration of diverse datasets at the Rat Genome Database

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Jennifer R Smith, Marek A Tutaj, Jyothi Thota, Logan Lamers, Adam C Gibson, Akhilanand Kundurthi, Varun Reddy Gollapally, Kent C Brodie, Stacy Zacher, Stanley J F Laulederkind, G Thomas Hayman, Shur-Jen Wang, Monika Tutaj, Mary L Kaldunski, Mahima Vedi, Wendy M Demos, Jeffrey L De Pons, Melinda R Dwinell, Anne E Kwitek
Database, Volume 2025, 2025, baae132, https://doi.org/10.1093/database/baae132
Published: 22 January 2025
Journal Article

Quantitative phenotype analysis to identify, validate and compare rat disease models

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Yiqing Zhao, Jennifer R Smith, Shur-Jen Wang, Melinda R Dwinell, Mary Shimoyama
Database, Volume 2019, 2019, baz037, https://doi.org/10.1093/database/baz037
Published: 02 April 2019
Journal Article

Integrated curation and data mining for disease and phenotype models at the Rat Genome Database

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Shur-Jen Wang, Stanley J F Laulederkind, Yiqing Zhao, G Thomas Hayman, Jennifer R Smith, Monika Tutaj, Jyothi Thota, Marek A Tutaj, Matthew J Hoffman, Elizabeth R Bolton, Jeffrey De Pons, Melinda R Dwinell, Mary Shimoyama
Database, Volume 2019, 2019, baz014, https://doi.org/10.1093/database/baz014
Published: 11 February 2019
Journal Article

The Chinchilla Research Resource Database: resource for an otolaryngology disease model

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Mary Shimoyama, Jennifer R. Smith, Jeff De Pons, Marek Tutaj, Pawjai Khampang, Wenzhou Hong, Christy B. Erbe, Garth D. Ehrlich, Lauren O. Bakaletz, Joseph E. Kerschner
Database, Volume 2016, 2016, baw073, https://doi.org/10.1093/database/baw073
Published: 12 May 2016
Journal Article

The Disease Portals, disease–gene annotation and the RGD disease ontology at the Rat Genome Database

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G. Thomas Hayman, Stanley J. F. Laulederkind, Jennifer R. Smith, Shur-Jen Wang, Victoria Petri, Rajni Nigam, Marek Tutaj, Jeff De Pons, Melinda R. Dwinell, Mary Shimoyama
Database, Volume 2016, 2016, baw034, https://doi.org/10.1093/database/baw034
Published: 23 March 2016
Journal Article

PhenoMiner: a quantitative phenotype database for the laboratory rat, Rattus norvegicus . Application in hypertension and renal disease

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Shur-Jen Wang, Stanley J. F. Laulederkind, G. Thomas Hayman, Victoria Petri, Weisong Liu, Jennifer R. Smith, Rajni Nigam, Melinda R. Dwinell, Mary Shimoyama
Database, Volume 2015, 2015, bau128, https://doi.org/10.1093/database/bau128
Published: 28 January 2015
Journal Article

OntoMate: a text-mining tool aiding curation at the Rat Genome Database

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Weisong Liu, Stanley J. F. Laulederkind, G. Thomas Hayman, Shur-Jen Wang, Rajni Nigam, Jennifer R. Smith, Jeff De Pons, Melinda R. Dwinell, Mary Shimoyama
Database, Volume 2015, 2015, bau129, https://doi.org/10.1093/database/bau129
Published: 25 January 2015
Journal Article

Analysis of disease-associated objects at the Rat Genome Database

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Shur-Jen Wang, Stanley J. F. Laulederkind, G. T. Hayman, Jennifer R. Smith, Victoria Petri, Timothy F. Lowry, Rajni Nigam, Melinda R. Dwinell, Elizabeth A. Worthey, Diane H. Munzenmaier, Mary Shimoyama, Howard J. Jacob
Database, Volume 2013, 2013, bat046, https://doi.org/10.1093/database/bat046
Published: 21 June 2013
Journal Article

PhenoMiner: quantitative phenotype curation at the rat genome database

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Stanley J F Laulederkind, Weisong Liu, Jennifer R Smith, G Thomas Hayman, Shur-Jen Wang, Rajni Nigam, Victoria Petri, Timothy F Lowry, Jeff de Pons, Melinda R Dwinell, Mary Shimoyama
Database, Volume 2013, 2013, bat015, https://doi.org/10.1093/database/bat015
Published: 19 April 2013
Journal Article

Ontology searching and browsing at the Rat Genome Database

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Stanley J. F. Laulederkind, Marek Tutaj, Mary Shimoyama, G. Thomas Hayman, Timothy F. Lowry, Rajni Nigam, Victoria Petri, Jennifer R. Smith, Shur-Jen Wang, Jeff de Pons, Melinda R. Dwinell, Howard J. Jacob
Database, Volume 2012, 2012, bas016, https://doi.org/10.1093/database/bas016
Published: 20 March 2012
Journal Article

The Rat Genome Database Pathway Portal

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Victoria Petri, Mary Shimoyama, G. Thomas Hayman, Jennifer R. Smith, Marek Tutaj, Jeff de Pons, Melinda R. Dwinell, Diane H. Munzenmaier, Simon N. Twigger, Howard J. Jacob, RGD Team
Database, Volume 2011, 2011, bar010, https://doi.org/10.1093/database/bar010
Published: 08 April 2011
Journal Article

The Rat Genome Database curation tool suite: a set of optimized software tools enabling efficient acquisition, organization, and presentation of biological data

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Stanley J. F. Laulederkind, Mary Shimoyama, G. Thomas Hayman, Timothy F. Lowry, Rajni Nigam, Victoria Petri, Jennifer R. Smith, Shur-Jen Wang, Jeff de Pons, George Kowalski, Weisong Liu, Wes Rood, Diane H. Munzenmaier, Melinda R. Dwinell, Simon N. Twigger, Howard J. Jacob, RGD Team
Database, Volume 2011, 2011, bar002, https://doi.org/10.1093/database/bar002
Published: 14 February 2011