Authors: Hongfei Lin
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Journal Article

Automatic genetic phenotype normalization from dysmorphology physical examinations: an overview of the BioCreative VIII—Task 3 competition

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Davy Weissenbacher, Xinwei Zhao, Jessica R C Priestley, Katherine M Szigety, Sarah F Schmidt, Karen O'Connor, Ekin Soysal, Kirk Roberts, Jiewei Qi, Ling Luo, Zhihao Yang, Hongfei Lin, Hajung Kim, Chanhwi Kim, Jiwoong Sohn, Tim Beck, Marek Rei, Sunkyu Kim, T Ian Simpson … Graciela Gonzalez-Hernandez
Database, Volume 2025, 2025, baaf051, https://doi.org/10.1093/database/baaf051
Published: 24 September 2025
Journal Article

JTIS: enhancing biomedical document-level relation extraction through joint training with intermediate steps

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Jiru Li, Dinghao Pan, Zhihao Yang, Yuanyuan Sun, Hongfei Lin, Jian Wang
Database, Volume 2024, 2024, baae125, https://doi.org/10.1093/database/baae125
Published: 19 December 2024
Journal Article

Chemical–protein interaction extraction via contextualized word representations and multihead attention

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Yijia Zhang, Hongfei Lin, Zhihao Yang, Jian Wang, Yuanyuan Sun
Database, Volume 2019, 2019, baz054, https://doi.org/10.1093/database/baz054
Published: 24 May 2019
Journal Article

Document triage for identifying protein–protein interactions affected by mutations: a neural network ensemble approach

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Ling Luo, Zhihao Yang, Hongfei Lin, Jian Wang
Database, Volume 2018, 2018, bay097, https://doi.org/10.1093/database/bay097
Published: 19 September 2018