Authors: Carlos-Francisco Méndez-Cruz
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Journal Article

Automatic extraction of transcriptional regulatory interactions of bacteria from biomedical literature using a BERT-based approach

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Alfredo Varela-Vega, Ali-Berenice Posada-Reyes, Carlos-Francisco Méndez-Cruz
Database, Volume 2024, 2024, baae094, https://doi.org/10.1093/database/baae094
Published: 30 August 2024
Journal Article

Knowledge extraction for assisted curation of summaries of bacterial transcription factor properties

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Carlos-Francisco Méndez-Cruz, Antonio Blanchet, Alan Godínez, Ignacio Arroyo-Fernández, Socorro Gama-Castro, Sara Berenice Martínez-Luna, Cristian González-Colín, Julio Collado-Vides
Database, Volume 2020, 2020, baaa109, https://doi.org/10.1093/database/baaa109
Published: 11 December 2020
Journal Article

First steps in automatic summarization of transcription factor properties for RegulonDB: classification of sentences about structural domains and regulated processes

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Carlos-Francisco Méndez-Cruz, Socorro Gama-Castro, Citlalli Mejía-Almonte, Marco-Polo Castillo-Villalba, Luis-José Muñiz-Rascado, Julio Collado-Vides
Database, Volume 2017, 2017, bax070, https://doi.org/10.1093/database/bax070
Published: 26 September 2017
Journal Article

Strategies towards digital and semi-automated curation in RegulonDB

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Fabio Rinaldi, Oscar Lithgow, Socorro Gama-Castro, Hilda Solano, Alejandra López-Fuentes, Luis José Muñiz Rascado, Cecilia Ishida-Gutiérrez, Carlos-Francisco Méndez-Cruz, Julio Collado-Vides
Database, Volume 2017, 2017, bax012, https://doi.org/10.1093/database/bax029
Published: 17 April 2017
Journal Article

Strategies towards digital and semi-automated curation in RegulonDB

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Fabio Rinaldi, Oscar Lithgow, Socorro Gama-Castro, Hilda Solano, Alejandra López-Fuentes, Luis José Muñiz Rascado, Cecilia Ishida-Gutiérrez, Carlos-Francisco Méndez-Cruz, Julio Collado-Vides
Database, Volume 2017, 2017, bax012, https://doi.org/10.1093/database/bax012
Published: 18 March 2017