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Authors: Allan Peter Davis
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Journal Article
Integrating AI-powered text mining from PubTator into the manual curation workflow at the Comparative Toxicogenomics Database
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Thomas C Wiegers, Allan Peter Davis, Jolene Wiegers, Daniela Sciaky, Fern Barkalow, Brent Wyatt, Melissa Strong, Roy McMorran, Sakib Abrar, Carolyn J Mattingly
Database, Volume 2025, 2025, baaf013, https://doi.org/10.1093/database/baaf013
Published: 20 February 2025
Journal Article
BioCreative V CDR task corpus: a resource for chemical disease relation extraction
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Jiao Li, Yueping Sun, Robin J. Johnson, Daniela Sciaky, Chih-Hsuan Wei, Robert Leaman, Allan Peter Davis, Carolyn J. Mattingly, Thomas C. Wiegers, Zhiyong Lu
Database, Volume 2016, 2016, baw068, https://doi.org/10.1093/database/baw068
Published: 08 May 2016
Journal Article
Assessing the state of the art in biomedical relation extraction: overview of the BioCreative V chemical-disease relation (CDR) task
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Chih-Hsuan Wei, Yifan Peng, Robert Leaman, Allan Peter Davis, Carolyn J. Mattingly, Jiao Li, Thomas C. Wiegers, Zhiyong Lu
Database, Volume 2016, 2016, baw032, https://doi.org/10.1093/database/baw032
Published: 19 March 2016
Journal Article
Web services-based text-mining demonstrates broad impacts for interoperability and process simplification
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Thomas C. Wiegers, Allan Peter Davis, Carolyn J. Mattingly
Database, Volume 2014, 2014, bau050, https://doi.org/10.1093/database/bau050
Published: 10 June 2014
Journal Article
A CTD–Pfizer collaboration: manual curation of 88 000 scientific articles text mined for drug–disease and drug–phenotype interactions
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Allan Peter Davis, Thomas C. Wiegers, Phoebe M. Roberts, Benjamin L. King, Jean M. Lay, Kelley Lennon-Hopkins, Daniela Sciaky, Robin Johnson, Heather Keating, Nigel Greene, Robert Hernandez, Kevin J. McConnell, Ahmed E. Enayetallah, Carolyn J. Mattingly
Database, Volume 2013, 2013, bat080, https://doi.org/10.1093/database/bat080
Published: 28 November 2013
Journal Article
Targeted journal curation as a method to improve data currency at the Comparative Toxicogenomics Database
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Allan Peter Davis, Robin J. Johnson, Kelley Lennon-Hopkins, Daniela Sciaky, Michael C. Rosenstein, Thomas C. Wiegers, Carolyn J. Mattingly
Database, Volume 2012, 2012, bas051, https://doi.org/10.1093/database/bas051
Published: 06 December 2012
Journal Article
Collaborative biocuration—text-mining development task for document prioritization for curation
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Thomas C. Wiegers, Allan Peter Davis, Carolyn J. Mattingly
Database, Volume 2012, 2012, bas037, https://doi.org/10.1093/database/bas037
Published: 22 November 2012
Journal Article
MEDIC: a practical disease vocabulary used at the Comparative Toxicogenomics Database
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Allan Peter Davis, Thomas C. Wiegers, Michael C. Rosenstein, Carolyn J. Mattingly
Database, Volume 2012, 2012, bar065, https://doi.org/10.1093/database/bar065
Published: 13 February 2012
Journal Article
The curation paradigm and application tool used for manual curation of the scientific literature at the Comparative Toxicogenomics Database
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Allan Peter Davis, Thomas C. Wiegers, Cynthia G. Murphy, Carolyn J. Mattingly
Database, Volume 2011, 2011, bar034, https://doi.org/10.1093/database/bar034
Published: 20 September 2011