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Database Cover Image for Volume 2016
Volume 2016
2016
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EISSN 1758-0463

Volume 2016, 2016

Original Articles (continued)

PeptiCKDdb—peptide- and protein-centric database for the investigation of genesis and progression of chronic kidney disease
Magdalena Krochmal, Marco Fernandes, Szymon Filip, Claudia Pontillo, Holger Husi, Jerome Zoidakis, Harald Mischak, Antonia Vlahou, Joachim Jankowski
Database, Volume 2016, 2016, baw128, https://doi.org/10.1093/database/baw128
BioCreative V BioC track overview: collaborative biocurator assistant task for BioGRID
Sun Kim, Rezarta Islamaj Doğan, Andrew Chatr-Aryamontri, Christie S. Chang, Rose Oughtred, Jennifer Rust, Riza Batista-Navarro, Jacob Carter, Sophia Ananiadou, Sérgio Matos, André Santos, David Campos, José Luís Oliveira, Onkar Singh, Jitendra Jonnagaddala, Hong-Jie Dai, Emily Chia-Yu Su, Yung-Chun Chang, Yu-Chen Su … Donald C. Comeau
Database, Volume 2016, 2016, baw121, https://doi.org/10.1093/database/baw121
PGD: a pangolin genome hub for the research community
Tze King Tan, Ka Yun Tan, Ranjeev Hari, Aini Mohamed Yusoff, Guat Jah Wong, Cheuk Chuen Siow, Naresh V.R. Mutha, Mike Rayko, Aleksey Komissarov, Pavel Dobrynin, Ksenia Krasheninnikova, Gaik Tamazian, Ian C. Paterson, Wesley C. Warren, Warren E. Johnson, Stephen J. O'Brien, Siew Woh Choo
Database, Volume 2016, 2016, baw063, https://doi.org/10.1093/database/baw063
The Global Genome Biodiversity Network (GGBN) Data Standard specification
G. Droege, K. Barker, O. Seberg, J. Coddington, E. Benson, W. G. Berendsohn, B. Bunk, C. Butler, E. M. Cawsey, J. Deck, M. Döring, P. Flemons, B. Gemeinholzer, A. Güntsch, T. Hollowell, P. Kelbert, I. Kostadinov, R. Kottmann, R. T. Lawlor … X. Zhou
Database, Volume 2016, 2016, baw125, https://doi.org/10.1093/database/baw125
3DFlu: database of sequence and structural variability of the influenza hemagglutinin at population scale
Giovanni Mazzocco, Michal Lazniewski, Piotr Migdał, Teresa Szczepińska, Jan P. Radomski, Dariusz Plewczynski
Database, Volume 2016, 2016, baw130, https://doi.org/10.1093/database/baw130
ASAP: a machine learning framework for local protein properties
Nadav Brandes, Dan Ofer, Michal Linial
Database, Volume 2016, 2016, baw133, https://doi.org/10.1093/database/baw133
The BEL information extraction workflow (BELIEF): evaluation in the BioCreative V BEL and IAT track
Sumit Madan, Sven Hodapp, Philipp Senger, Sam Ansari, Justyna Szostak, Julia Hoeng, Manuel Peitsch, Juliane Fluck
Database, Volume 2016, 2016, baw136, https://doi.org/10.1093/database/baw136
Disease named entity recognition by combining conditional random fields and bidirectional recurrent neural networks
Qikang Wei, Tao Chen, Ruifeng Xu, Yulan He, Lin Gui
Database, Volume 2016, 2016, baw140, https://doi.org/10.1093/database/baw140
NERChem: adapting NERBio to chemical patents via full-token features and named entity feature with chemical sub-class composition
Richard Tzong-Han Tsai, Yu-Cheng Hsiao, Po-Ting Lai
Database, Volume 2016, 2016, baw135, https://doi.org/10.1093/database/baw135

Review

A comprehensive view of the web-resources related to sericulture
Deepika Singh, Hasnahana Chetia, Debajyoti Kabiraj, Swagata Sharma, Anil Kumar, Pragya Sharma, Manab Deka, Utpal Bora
Database, Volume 2016, 2016, baw086, https://doi.org/10.1093/database/baw086
Mining biomedical images towards valuable information retrieval in biomedical and life sciences
Zeeshan Ahmed, Saman Zeeshan, Thomas Dandekar
Database, Volume 2016, 2016, baw118, https://doi.org/10.1093/database/baw118
Text mining resources for the life sciences
Piotr Przybyła, Matthew Shardlow, Sophie Aubin, Robert Bossy, Richard Eckart de Castilho, Stelios Piperidis, John McNaught, Sophia Ananiadou
Database, Volume 2016, 2016, baw145, https://doi.org/10.1093/database/baw145

Erratum

Ensembl comparative genomics resources
Javier Herrero, Matthieu Muffato, Kathryn Beal, Stephen Fitzgerald, Leo Gordon, Miguel Pignatelli, Albert J. Vilella, Stephen M. J. Searle, Ridwan Amode, Simon Brent, William Spooner, Eugene Kulesha, Andrew Yates, Paul Flicek
Database, Volume 2016, 2016, baw053, https://doi.org/10.1093/database/baw053
Chado use case: storing genomic, genetic and breeding data of Rosaceae and Gossypium crops in Chado
Sook Jung, Taein Lee, Stephen Ficklin, Jing Yu, Chun-Huai Cheng, Dorrie Main
Database, Volume 2016, 2016, baw058, https://doi.org/10.1093/database/baw058
Predicting structured metadata from unstructured metadata
Lisa Posch, Maryam Panahiazar, Michel Dumontier, Olivier Gevaert
Database, Volume 2016, 2016, baw097, https://doi.org/10.1093/database/baw097
Sieve-based coreference resolution enhances semi-supervised learning model for chemical-induced disease relation extraction
Hoang-Quynh Le, Mai-Vu Tran, Thanh Hai Dang, Quang-Thuy Ha, Nigel Collier
Database, Volume 2016, 2016, baw131, https://doi.org/10.1093/database/baw131
Mining biomedical images towards valuable information retrieval in biomedical and life sciences
Zeeshan Ahmed, Saman Zeeshan, Thomas Dandekar
Database, Volume 2016, 2016, baw134, https://doi.org/10.1093/database/baw134

Corrigendum

PolyQ 2.0: an improved version of PolyQ, a database of human polyglutamine proteins
Chen Li, Jeremy Nagel, Steve Androulakis, Christopher J. Lupton, Jiangning Song, Ashley M. Buckle
Database, Volume 2016, 2016, baw050, https://doi.org/10.1093/database/baw050
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